Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923882.1_cds_XP_016472361.1_64601
CDS Infomation

[gene=LOC107794392] [db_xref=GeneID:107794392] [protein=poly(A)-specific ribonuclease PARN-like] [protein_id=XP_016472361.1] [location=complement(join(18437..19089,19578..19793,19885..19999,20088..20218,20458..20469,20548..20736,20953..21083,22063..22397))] [gbkey=CDS]
Sequence

ATGTTACAGAGGCGCTTATTTTGCACGAGGATTTCGAAAACCATCCTCCAATCAAACCCC
GGACATAATCATAGCAAATGGAGTGTAAAGCAAGTTACCAAGTCCAGTTTCTCAGCGACA
TTAGAAGAGATAAGTACTTTCATCTCCGACTCTGATTTCATCGCCGTCTCATTGAAGAAT
ACTGGGGCCTACTCTGCACCCTGGCAGCGTATTCTGCCAATTGACACCGCACACACCGCC
TATCTCAAAGCCAAATATGCCGCCGAACGGTTTCAGGTCCTTCAGTTCGCCGTTTGCCCT
TTCTCCATTAGAGGTTCCAAGCTCATCGTTCACCCATACAACTTTCATTTGTTCCCTCGT
GATGAGTTAAAAATAGGGATGCCTTCTTATAGTTTCTCTTGTCAATCATCATATTTGACC
TCTATGGCTCGACAAGGTTTTGATTTCAATGCCTGCATATATGATGGCATATCATATTTA
TCCAGATCGCAAGAATCAGCTGCAATAGATAGAATTGGAAATGCATCACATATTACCCGT
AAAGTGCAATCTCCATCAGGGCATACAGTTGCTGATTCCGTATTTGCAGAAAGGATCAAA
TCTCGAGTTAAGCATTGGATAAGTTCTTGCAGAGACACCAACAAGAAGCCTGAAGATGCT
TTAATCACTTTTATATTGGGTCAGACACTGAAGGATTTTGTTGATGTCATACCTTTACTA
ACCCCAGCAAAGGGAGGGATGACAATGTCTATTCGAGTTGTTTTGACAAGTTCAGAAGAA
GACAAAATTCTTTTACAGAAGGAACTTCAAAATGAGGAGAAGGAGCATAACAAGCGCATT
CGTGGCTTTCGAGAGGTGATCGATTTGATTTCCGCTTCTCAGAAACCCGTTGTTGTCCAC
AACTCTCTTAATGATTTTACCTTTGTCCATTCCAAGTTCTTAGCTCCATTGCCACCAACG
CTGGATGAATTCAAAAGTTCATTATGTGAGGTCTTCCCAAACGTACTTGATGTCACCCAT
CTTATGAAGGAAATCAGCCCTCTGAAAAAAGTGAACAATTTGCCTGCAAGTATCTCATAT
TTGAAACAAAGATTTTTTGCCCCTGTTGATATGGAGATATCTAACCAAGCAGCTGAGGCC
ACGGAAGTGAAGACTCTGGGACATGATGTTTTGAAGATAAGCGAATTGTTTGCGAAGCTG
TACTCCATACTGAAAATTGCTCCAAAAGCTCCTGAAGCTGCTGAGGGCCATTTGCCTGAT
GCAATTGAATGCTACATAAACTTGTTTAACCCTTGCTTTGCCAGTTCTCATGGTCTTGCT
GATGAAGGTGTTAGTGTGTGGACTGACAATACTAGAAAAATTAGTATTAAGAATCTGGTT
TTCCTATGGGGATTCAGGGGTGGGACATCTGCAGGACAGCTGAAAAGCCTCCTATATGGT
TCACATGAAGTTTTCCATAATGAATTTGATGTTAGGCTAGTGGATAAAAGCTGTGCTGTA
GTTGTTTTTGGGAACCCTGGCTTTTCGGAAGTCCTGTTGCAGCTAATGGATTCTGGAGGT
ATCTGTACTAGTACCCTGAAGGAGATGCTGGCAGACGGCCTGACAGCCGCAGGTTATGAG
GCATACCAAAAAGTCTGTGAGTTAGGTCTATGGGAAGCAGATTTGGCCAGTTCATTCGAA
AGGGCTTTGGAAGAAAATGATAGCTTCTCAGAAGCTCACTCTCAGGAGCTTCCGGGGATA
TGTTGGAATAATGATGAAATGATTAACCTGGATGACCTTTAA

Peptide Sequence

PEP ID

XP_016472361.1
PEP Infomation

PREDICTED: poly(A)-specific ribonuclease PARN-like [Nicotiana tabacum]
Sequence

MLQRRLFCTRISKTILQSNPGHNHSKWSVKQVTKSSFSATLEEISTFISDSDFIAVSLKN
TGAYSAPWQRILPIDTAHTAYLKAKYAAERFQVLQFAVCPFSIRGSKLIVHPYNFHLFPR
DELKIGMPSYSFSCQSSYLTSMARQGFDFNACIYDGISYLSRSQESAAIDRIGNASHITR
KVQSPSGHTVADSVFAERIKSRVKHWISSCRDTNKKPEDALITFILGQTLKDFVDVIPLL
TPAKGGMTMSIRVVLTSSEEDKILLQKELQNEEKEHNKRIRGFREVIDLISASQKPVVVH
NSLNDFTFVHSKFLAPLPPTLDEFKSSLCEVFPNVLDVTHLMKEISPLKKVNNLPASISY
LKQRFFAPVDMEISNQAAEATEVKTLGHDVLKISELFAKLYSILKIAPKAPEAAEGHLPD
AIECYINLFNPCFASSHGLADEGVSVWTDNTRKISIKNLVFLWGFRGGTSAGQLKSLLYG
SHEVFHNEFDVRLVDKSCAVVVFGNPGFSEVLLQLMDSGGICTSTLKEMLADGLTAAGYE
AYQKVCELGLWEADLASSFERALEENDSFSEAHSQELPGICWNNDEMINLDDL

Transcript Sequence

Gene sequence data has not been registered.